Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp140Q6NSQ5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp140Q6NSQ5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp140Q6NSQ5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp140Q6NSQ5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.57■□□□□ 0.08
Sp140Q6NSQ5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sp140Q6NSQ5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Gm9103-201ENSMUST00000119371 405 ntBASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Gm11780-201ENSMUST00000136880 516 ntBASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Gm34391-201ENSMUST00000203706 907 ntBASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sp140Q6NSQ5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Gm6296-201ENSMUST00000222599 943 ntBASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sp140Q6NSQ5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sp140Q6NSQ5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Sp140Q6NSQ5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms