Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Gm44454-201ENSMUST00000198541 138 ntBASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Gm9172-201ENSMUST00000212092 954 ntBASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt39Q6IFX4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Rprl3-201ENSMUST00000157400 290 ntBASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt39Q6IFX4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Gm14722-201ENSMUST00000118943 689 ntBASIC16.92■□□□□ 0.3
Krt39Q6IFX4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.92■□□□□ 0.3
Krt39Q6IFX4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms