Protein–RNA interactions for Protein: Q68FE2

Atg9a, Autophagy-related protein 9A, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg9aQ68FE2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Atg9aQ68FE2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Atg9aQ68FE2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg9aQ68FE2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg9aQ68FE2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg9aQ68FE2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg9aQ68FE2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg9aQ68FE2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Atg9aQ68FE2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg9aQ68FE2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Atg9aQ68FE2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Atg9aQ68FE2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Gm8396-201ENSMUST00000057361 823 ntBASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atg9aQ68FE2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Gm18889-201ENSMUST00000174284 929 ntBASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Gm43767-201ENSMUST00000198933 381 ntBASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 BC037039-201ENSMUST00000192003 2205 ntBASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atg9aQ68FE2 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.31■□□□□ 0.52
Atg9aQ68FE2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atg9aQ68FE2 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atg9aQ68FE2 Mir6990-201ENSMUST00000183724 91 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms