Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Gm14822-201ENSMUST00000122247 291 ntBASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ctnna3Q65CL1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ctnna3Q65CL1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ctnna3Q65CL1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Gm26308-201ENSMUST00000157768 69 ntBASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.21■□□□□ 0.35
Ctnna3Q65CL1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.21■□□□□ 0.34
Ctnna3Q65CL1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ctnna3Q65CL1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms