Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Six2Q62232 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Six2Q62232 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Six2Q62232 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Six2Q62232 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Six2Q62232 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.3■□□□□ 0.2
Six2Q62232 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.3■□□□□ 0.2
Six2Q62232 Gm7862-201ENSMUST00000121461 292 ntBASIC16.3■□□□□ 0.2
Six2Q62232 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.3■□□□□ 0.2
Six2Q62232 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Gm37153-201ENSMUST00000193637 231 ntBASIC16.3■□□□□ 0.2
Six2Q62232 Gm9682-201ENSMUST00000197505 556 ntBASIC16.3■□□□□ 0.2
Six2Q62232 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Six2Q62232 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Six2Q62232 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six2Q62232 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Six2Q62232 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
Six2Q62232 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.29■□□□□ 0.2
Six2Q62232 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Six2Q62232 Gm7230-201ENSMUST00000173026 815 ntBASIC16.29■□□□□ 0.2
Six2Q62232 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.29■□□□□ 0.2
Six2Q62232 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.29■□□□□ 0.2
Six2Q62232 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.29■□□□□ 0.2
Six2Q62232 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six2Q62232 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.29■□□□□ 0.2
Six2Q62232 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Six2Q62232 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.28■□□□□ 0.2
Six2Q62232 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Six2Q62232 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Six2Q62232 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Six2Q62232 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.28■□□□□ 0.2
Six2Q62232 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Six2Q62232 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.28■□□□□ 0.2
Six2Q62232 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six2Q62232 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.28■□□□□ 0.2
Six2Q62232 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Six2Q62232 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Six2Q62232 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.27■□□□□ 0.2
Six2Q62232 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.27■□□□□ 0.2
Six2Q62232 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six2Q62232 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Six2Q62232 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six2Q62232 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six2Q62232 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six2Q62232 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.27■□□□□ 0.2
Six2Q62232 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six2Q62232 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Six2Q62232 Gm7153-201ENSMUST00000117092 455 ntBASIC16.27■□□□□ 0.2
Six2Q62232 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.27■□□□□ 0.2
Six2Q62232 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.27■□□□□ 0.2
Six2Q62232 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.27■□□□□ 0.2
Six2Q62232 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six2Q62232 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Six2Q62232 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Six2Q62232 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six2Q62232 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six2Q62232 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six2Q62232 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six2Q62232 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six2Q62232 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Six2Q62232 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms