Protein–RNA interactions for Protein: Q62176

Rbm38, RNA-binding protein 38, mousemouse

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm38Q62176 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rbm38Q62176 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rbm38Q62176 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.79□□□□□ -0.36
Rbm38Q62176 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.79□□□□□ -0.36
Rbm38Q62176 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.79□□□□□ -0.36
Rbm38Q62176 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rbm38Q62176 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rbm38Q62176 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rbm38Q62176 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.78□□□□□ -0.36
Rbm38Q62176 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rbm38Q62176 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.78□□□□□ -0.36
Rbm38Q62176 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Carlr-201ENSMUST00000181515 2574 ntBASIC12.78□□□□□ -0.36
Rbm38Q62176 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.78□□□□□ -0.36
Rbm38Q62176 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.78□□□□□ -0.36
Rbm38Q62176 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.78□□□□□ -0.36
Rbm38Q62176 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.78□□□□□ -0.36
Rbm38Q62176 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rbm38Q62176 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rbm38Q62176 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rbm38Q62176 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rbm38Q62176 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rbm38Q62176 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rbm38Q62176 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.77□□□□□ -0.36
Rbm38Q62176 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms