Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.22□□□□□ -0.13
VcanQ62059 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.22□□□□□ -0.13
VcanQ62059 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.22□□□□□ -0.13
VcanQ62059 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.22□□□□□ -0.13
VcanQ62059 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
VcanQ62059 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.22□□□□□ -0.13
VcanQ62059 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.22□□□□□ -0.13
VcanQ62059 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
VcanQ62059 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Gm5566-201ENSMUST00000116118 459 ntBASIC14.22□□□□□ -0.13
VcanQ62059 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.22□□□□□ -0.13
VcanQ62059 Gm15782-201ENSMUST00000121073 445 ntBASIC14.22□□□□□ -0.13
VcanQ62059 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VcanQ62059 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.21□□□□□ -0.13
VcanQ62059 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Gm12091-201ENSMUST00000146791 830 ntBASIC14.21□□□□□ -0.13
VcanQ62059 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VcanQ62059 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VcanQ62059 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VcanQ62059 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Gm9002-201ENSMUST00000178437 499 ntBASIC14.21□□□□□ -0.13
VcanQ62059 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.21□□□□□ -0.13
VcanQ62059 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VcanQ62059 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VcanQ62059 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
VcanQ62059 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VcanQ62059 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VcanQ62059 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.2□□□□□ -0.14
VcanQ62059 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VcanQ62059 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VcanQ62059 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.2□□□□□ -0.14
VcanQ62059 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.2□□□□□ -0.14
VcanQ62059 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VcanQ62059 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.2□□□□□ -0.14
VcanQ62059 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.2□□□□□ -0.14
VcanQ62059 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.2□□□□□ -0.14
VcanQ62059 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VcanQ62059 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
VcanQ62059 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.2□□□□□ -0.14
VcanQ62059 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
VcanQ62059 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VcanQ62059 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VcanQ62059 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VcanQ62059 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.19□□□□□ -0.14
VcanQ62059 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.19□□□□□ -0.14
VcanQ62059 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.19□□□□□ -0.14
VcanQ62059 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.19□□□□□ -0.14
VcanQ62059 Mir7070-201ENSMUST00000183657 86 ntBASIC14.19□□□□□ -0.14
VcanQ62059 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.19□□□□□ -0.14
VcanQ62059 Gm37917-201ENSMUST00000194711 392 ntBASIC14.19□□□□□ -0.14
VcanQ62059 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms