Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col11a1Q61245 Gm9797-201ENSMUST00000052902 613 ntBASIC16.92■□□□□ 0.3
Col11a1Q61245 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col11a1Q61245 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.91■□□□□ 0.3
Col11a1Q61245 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col11a1Q61245 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.91■□□□□ 0.3
Col11a1Q61245 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.91■□□□□ 0.3
Col11a1Q61245 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.91■□□□□ 0.3
Col11a1Q61245 Gm45098-201ENSMUST00000207179 657 ntBASIC16.91■□□□□ 0.3
Col11a1Q61245 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.91■□□□□ 0.3
Col11a1Q61245 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.91■□□□□ 0.3
Col11a1Q61245 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.91■□□□□ 0.3
Col11a1Q61245 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col11a1Q61245 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.91■□□□□ 0.3
Col11a1Q61245 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col11a1Q61245 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.91■□□□□ 0.3
Col11a1Q61245 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.91■□□□□ 0.3
Col11a1Q61245 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col11a1Q61245 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col11a1Q61245 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col11a1Q61245 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col11a1Q61245 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col11a1Q61245 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col11a1Q61245 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.9■□□□□ 0.3
Col11a1Q61245 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.9■□□□□ 0.3
Col11a1Q61245 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.9■□□□□ 0.3
Col11a1Q61245 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col11a1Q61245 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.9■□□□□ 0.3
Col11a1Q61245 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col11a1Q61245 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col11a1Q61245 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col11a1Q61245 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col11a1Q61245 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col11a1Q61245 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col11a1Q61245 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.9■□□□□ 0.3
Col11a1Q61245 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col11a1Q61245 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Col11a1Q61245 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col11a1Q61245 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col11a1Q61245 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col11a1Q61245 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col11a1Q61245 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col11a1Q61245 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col11a1Q61245 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.88■□□□□ 0.29
Col11a1Q61245 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.88■□□□□ 0.29
Col11a1Q61245 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col11a1Q61245 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Col11a1Q61245 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Col11a1Q61245 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Col11a1Q61245 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.87■□□□□ 0.29
Col11a1Q61245 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.87■□□□□ 0.29
Col11a1Q61245 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col11a1Q61245 Gm10766-202ENSMUST00000194123 606 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms