Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NfkbibQ60778 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NfkbibQ60778 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NfkbibQ60778 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.34■□□□□ 0.53
NfkbibQ60778 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.34■□□□□ 0.53
NfkbibQ60778 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.34■□□□□ 0.53
NfkbibQ60778 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.34■□□□□ 0.53
NfkbibQ60778 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.34■□□□□ 0.53
NfkbibQ60778 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NfkbibQ60778 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.34■□□□□ 0.53
NfkbibQ60778 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NfkbibQ60778 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
NfkbibQ60778 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NfkbibQ60778 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.33■□□□□ 0.53
NfkbibQ60778 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.33■□□□□ 0.53
NfkbibQ60778 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NfkbibQ60778 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NfkbibQ60778 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.33■□□□□ 0.53
NfkbibQ60778 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NfkbibQ60778 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NfkbibQ60778 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NfkbibQ60778 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.33■□□□□ 0.52
NfkbibQ60778 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.33■□□□□ 0.52
NfkbibQ60778 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.33■□□□□ 0.52
NfkbibQ60778 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.33■□□□□ 0.52
NfkbibQ60778 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NfkbibQ60778 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NfkbibQ60778 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NfkbibQ60778 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.33■□□□□ 0.52
NfkbibQ60778 Gm10154-201ENSMUST00000084445 354 ntBASIC18.33■□□□□ 0.52
NfkbibQ60778 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.33■□□□□ 0.52
NfkbibQ60778 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NfkbibQ60778 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NfkbibQ60778 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NfkbibQ60778 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NfkbibQ60778 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NfkbibQ60778 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.33■□□□□ 0.52
NfkbibQ60778 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NfkbibQ60778 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NfkbibQ60778 Asic1-205ENSMUST00000228185 1818 ntBASIC18.33■□□□□ 0.52
NfkbibQ60778 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NfkbibQ60778 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.32■□□□□ 0.52
NfkbibQ60778 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.32■□□□□ 0.52
NfkbibQ60778 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.32■□□□□ 0.52
NfkbibQ60778 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.32■□□□□ 0.52
NfkbibQ60778 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.32■□□□□ 0.52
NfkbibQ60778 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NfkbibQ60778 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.31■□□□□ 0.52
NfkbibQ60778 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NfkbibQ60778 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.3■□□□□ 0.52
NfkbibQ60778 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NfkbibQ60778 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NfkbibQ60778 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NfkbibQ60778 BC037039-201ENSMUST00000192003 2205 ntBASIC18.3■□□□□ 0.52
NfkbibQ60778 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NfkbibQ60778 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NfkbibQ60778 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NfkbibQ60778 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NfkbibQ60778 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms