Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Gm17837-201ENSMUST00000186435 985 ntBASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Gm10154-201ENSMUST00000084445 354 ntBASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc88aQ5SNZ0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc88aQ5SNZ0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Mir7684-201ENSMUST00000183858 60 ntBASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc88aQ5SNZ0 Gm25287-201ENSMUST00000103846 110 ntBASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 Gm22918-201ENSMUST00000103855 110 ntBASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc88aQ5SNZ0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Gm12151-201ENSMUST00000121374 290 ntBASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.45■□□□□ 0.38
Ccdc88aQ5SNZ0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms