Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav2Q5R1I9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Gm27300-201ENSMUST00000184085 97 ntBASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Gm27335-201ENSMUST00000184758 97 ntBASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav2Q5R1I9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Gm6736-201ENSMUST00000166583 948 ntBASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav2Q5R1I9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms