Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav7-2Q5R1I3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Olfr129-201ENSMUST00000122318 993 ntBASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav7-2Q5R1I3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Gm44454-201ENSMUST00000198541 138 ntBASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav7-2Q5R1I3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav7-2Q5R1I3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms