Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-4Q5R1I0 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Dancr-204ENSMUST00000132389 2347 ntBASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-4Q5R1I0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Trav6d-4Q5R1I0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav6d-4Q5R1I0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Gm13597-201ENSMUST00000121239 375 ntBASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6d-4Q5R1I0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms