Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Efs-202ENSMUST00000227037 2540 ntBASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm37722-201ENSMUST00000193757 208 ntBASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm5417-201ENSMUST00000079706 384 ntBASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms