Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Gm27275-201ENSMUST00000184318 272 ntBASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Trmt13-210ENSMUST00000198454 880 ntBASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trav3-3Q5R1C3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-3Q5R1C3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-3Q5R1C3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav3-3Q5R1C3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-3Q5R1C3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Trav3-3Q5R1C3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav3-3Q5R1C3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav3-3Q5R1C3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3-3Q5R1C3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav3-3Q5R1C3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Gm43183-201ENSMUST00000200632 547 ntBASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trav3-3Q5R1C3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Gm9731-201ENSMUST00000209480 747 ntBASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms