Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Gm8318-201ENSMUST00000182954 872 ntBASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Rps4l-201ENSMUST00000071745 943 ntBASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf20Q5DTM8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Gm17971-201ENSMUST00000190239 806 ntBASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf20Q5DTM8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Gm25990-201ENSMUST00000102440 86 ntBASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Gm6089-201ENSMUST00000197666 938 ntBASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Gm6376-201ENSMUST00000209407 580 ntBASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.23■□□□□ 0.51
Rnf20Q5DTM8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rnf20Q5DTM8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Gm7153-201ENSMUST00000117092 455 ntBASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms