Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc9Q3V038 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ttc9Q3V038 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc9Q3V038 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ttc9Q3V038 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ttc9Q3V038 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Mir1895-201ENSMUST00000122615 79 ntBASIC16.32■□□□□ 0.2
Ttc9Q3V038 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.32■□□□□ 0.2
Ttc9Q3V038 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.32■□□□□ 0.2
Ttc9Q3V038 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.32■□□□□ 0.2
Ttc9Q3V038 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ttc9Q3V038 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Gm23547-201ENSMUST00000158210 271 ntBASIC16.31■□□□□ 0.2
Ttc9Q3V038 Gm27646-201ENSMUST00000183989 110 ntBASIC16.31■□□□□ 0.2
Ttc9Q3V038 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.31■□□□□ 0.2
Ttc9Q3V038 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.31■□□□□ 0.2
Ttc9Q3V038 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ttc9Q3V038 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Gm27494-201ENSMUST00000184735 189 ntBASIC16.3■□□□□ 0.2
Ttc9Q3V038 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ttc9Q3V038 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.3■□□□□ 0.2
Ttc9Q3V038 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ttc9Q3V038 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc9Q3V038 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc9Q3V038 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ttc9Q3V038 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Ttc9Q3V038 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms