Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 Gm15222-202ENSMUST00000228667 1726 ntBASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Arhgef40Q3UPH7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Arhgef40Q3UPH7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Gm24694-201ENSMUST00000180054 110 ntBASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Gm27663-201ENSMUST00000184839 110 ntBASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Arhgef40Q3UPH7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm24543-201ENSMUST00000103867 82 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm29310-201ENSMUST00000185468 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21825-201ENSMUST00000185728 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm29109-201ENSMUST00000185895 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21896-201ENSMUST00000186520 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21873-201ENSMUST00000186728 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21794-201ENSMUST00000187056 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21880-201ENSMUST00000187275 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21826-201ENSMUST00000187451 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21198-201ENSMUST00000188393 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21749-201ENSMUST00000189343 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21901-201ENSMUST00000189568 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm29424-201ENSMUST00000189716 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm28599-201ENSMUST00000189838 694 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21867-201ENSMUST00000189917 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm29269-201ENSMUST00000190087 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21722-201ENSMUST00000190153 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm28423-201ENSMUST00000190701 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21899-201ENSMUST00000190745 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21910-201ENSMUST00000191163 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21849-201ENSMUST00000191571 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm28678-201ENSMUST00000191593 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm20910-201ENSMUST00000193268 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm21871-201ENSMUST00000194621 696 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm43433-201ENSMUST00000196573 481 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Gm45412-201ENSMUST00000210217 2275 ntBASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Arhgef40Q3UPH7 Syt7-204ENSMUST00000223586 1344 ntBASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Arhgef40Q3UPH7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Gm5566-201ENSMUST00000116118 459 ntBASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Gm6263-201ENSMUST00000120029 1342 ntBASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
Arhgef40Q3UPH7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms