Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc4Q3UP44 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Gm18246-201ENSMUST00000221023 728 ntBASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc4Q3UP44 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Celf4-206ENSMUST00000224553 1729 ntBASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc4Q3UP44 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc4Q3UP44 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms