Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Gm8131-201ENSMUST00000213783 1570 ntBASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b2Q3UJB0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Gm9719-201ENSMUST00000162765 543 ntBASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b2Q3UJB0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Gm4875-201ENSMUST00000118257 786 ntBASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b2Q3UJB0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Gm11918-201ENSMUST00000121660 179 ntBASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Gm17150-201ENSMUST00000165577 381 ntBASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Gm37917-201ENSMUST00000194711 392 ntBASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3b2Q3UJB0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Gm5566-201ENSMUST00000116118 459 ntBASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms