Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Gm18246-201ENSMUST00000221023 728 ntBASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tmem88bQ3TYP4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Gm23547-201ENSMUST00000158210 271 ntBASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tmem88bQ3TYP4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Gm27622-201ENSMUST00000183779 60 ntBASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tmem88bQ3TYP4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Gm22065-201ENSMUST00000103753 110 ntBASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Gm22066-201ENSMUST00000103761 110 ntBASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Gm24932-201ENSMUST00000103763 110 ntBASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Gm24115-201ENSMUST00000103799 110 ntBASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Gm22190-201ENSMUST00000103827 110 ntBASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Gm22191-201ENSMUST00000103831 110 ntBASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Gm24721-201ENSMUST00000103849 110 ntBASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Gm28018-201ENSMUST00000103869 110 ntBASIC12.71□□□□□ -0.37
Tmem88bQ3TYP4 Gm26399-201ENSMUST00000103937 110 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms