Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.36□□□□□ -0.11
Treml4Q3LRV9 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Treml4Q3LRV9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.35□□□□□ -0.11
Treml4Q3LRV9 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Treml4Q3LRV9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Gm5177-201ENSMUST00000183092 997 ntBASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Gm44335-201ENSMUST00000196879 141 ntBASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Gm44297-201ENSMUST00000198304 141 ntBASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Gm44346-201ENSMUST00000198851 141 ntBASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Treml4Q3LRV9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms