Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim63Q38HM4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.67□□□□□ -0.38
Trim63Q38HM4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Gm14117-201ENSMUST00000122417 843 ntBASIC12.67□□□□□ -0.38
Trim63Q38HM4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.67□□□□□ -0.38
Trim63Q38HM4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim63Q38HM4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.66□□□□□ -0.38
Trim63Q38HM4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim63Q38HM4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.66□□□□□ -0.38
Trim63Q38HM4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Acot6-202ENSMUST00000222921 3622 ntBASIC12.66□□□□□ -0.38
Trim63Q38HM4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Gm13534-201ENSMUST00000121169 513 ntBASIC12.66□□□□□ -0.38
Trim63Q38HM4 Mir2861-201ENSMUST00000175539 82 ntBASIC12.66□□□□□ -0.38
Trim63Q38HM4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.66□□□□□ -0.38
Trim63Q38HM4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim63Q38HM4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.65□□□□□ -0.38
Trim63Q38HM4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.65□□□□□ -0.38
Trim63Q38HM4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.65□□□□□ -0.38
Trim63Q38HM4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.65□□□□□ -0.38
Trim63Q38HM4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.65□□□□□ -0.38
Trim63Q38HM4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms