Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ush2AQ2QI47 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Gm12566-201ENSMUST00000121479 359 ntBASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Ush2AQ2QI47 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 AC156016.3-201ENSMUST00000228623 344 ntBASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Gm6222-201ENSMUST00000120787 396 ntBASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Gm10156-201ENSMUST00000122364 462 ntBASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Gm10012-201ENSMUST00000078252 192 ntBASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Gm9368-201ENSMUST00000219348 831 ntBASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ush2AQ2QI47 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Mir5120-201ENSMUST00000175020 78 ntBASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Mir6958-201ENSMUST00000184207 73 ntBASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Gm17823-201ENSMUST00000217830 1006 ntBASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Gm8227-201ENSMUST00000223306 571 ntBASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Trav13-3-201ENSMUST00000117226 336 ntBASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Gm29396-201ENSMUST00000185659 716 ntBASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 AC107711.5-202ENSMUST00000226429 702 ntBASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Gm10339-203ENSMUST00000225409 1671 ntBASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Gm13047-201ENSMUST00000117116 815 ntBASIC8.01□□□□□ -1.13
Ush2AQ2QI47 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Ush2AQ2QI47 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms