Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.15□□□□□ -0.62
Hspg2Q05793 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.15□□□□□ -0.62
Hspg2Q05793 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hspg2Q05793 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hspg2Q05793 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hspg2Q05793 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Hspg2Q05793 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.15□□□□□ -0.63
Hspg2Q05793 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.14□□□□□ -0.63
Hspg2Q05793 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.14□□□□□ -0.63
Hspg2Q05793 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Hspg2Q05793 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.14□□□□□ -0.63
Hspg2Q05793 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.14□□□□□ -0.63
Hspg2Q05793 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.14□□□□□ -0.63
Hspg2Q05793 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.14□□□□□ -0.63
Hspg2Q05793 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Hspg2Q05793 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hspg2Q05793 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.14□□□□□ -0.63
Hspg2Q05793 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hspg2Q05793 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Gm38241-201ENSMUST00000192641 898 ntBASIC11.14□□□□□ -0.63
Hspg2Q05793 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hspg2Q05793 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hspg2Q05793 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Hspg2Q05793 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Hspg2Q05793 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Gm21854-201ENSMUST00000179901 471 ntBASIC11.13□□□□□ -0.63
Hspg2Q05793 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.13□□□□□ -0.63
Hspg2Q05793 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Hspg2Q05793 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hspg2Q05793 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.13□□□□□ -0.63
Hspg2Q05793 Gm9257-201ENSMUST00000221254 232 ntBASIC11.13□□□□□ -0.63
Hspg2Q05793 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Hspg2Q05793 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Hspg2Q05793 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.13□□□□□ -0.63
Hspg2Q05793 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hspg2Q05793 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Gm9719-201ENSMUST00000162765 543 ntBASIC11.12□□□□□ -0.63
Hspg2Q05793 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.12□□□□□ -0.63
Hspg2Q05793 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Asic1-205ENSMUST00000228185 1818 ntBASIC11.12□□□□□ -0.63
Hspg2Q05793 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Gm8318-201ENSMUST00000182954 872 ntBASIC11.12□□□□□ -0.63
Hspg2Q05793 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.12□□□□□ -0.63
Hspg2Q05793 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms