Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.66□□□□□ -0.22
SgcbP82349 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.66□□□□□ -0.22
SgcbP82349 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.66□□□□□ -0.22
SgcbP82349 Gm45167-201ENSMUST00000208007 322 ntBASIC13.66□□□□□ -0.22
SgcbP82349 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.66□□□□□ -0.22
SgcbP82349 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.66□□□□□ -0.22
SgcbP82349 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.66□□□□□ -0.22
SgcbP82349 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.66□□□□□ -0.22
SgcbP82349 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SgcbP82349 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.66□□□□□ -0.22
SgcbP82349 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SgcbP82349 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SgcbP82349 Gm9682-201ENSMUST00000197505 556 ntBASIC13.65□□□□□ -0.22
SgcbP82349 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.65□□□□□ -0.22
SgcbP82349 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
SgcbP82349 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SgcbP82349 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SgcbP82349 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.64□□□□□ -0.23
SgcbP82349 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SgcbP82349 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SgcbP82349 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.64□□□□□ -0.23
SgcbP82349 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.64□□□□□ -0.23
SgcbP82349 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.64□□□□□ -0.23
SgcbP82349 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SgcbP82349 Gm42790-201ENSMUST00000201268 969 ntBASIC13.64□□□□□ -0.23
SgcbP82349 Gm5364-201ENSMUST00000216789 889 ntBASIC13.64□□□□□ -0.23
SgcbP82349 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.64□□□□□ -0.23
SgcbP82349 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SgcbP82349 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SgcbP82349 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SgcbP82349 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Prob1-201ENSMUST00000097619 3021 ntBASIC13.63□□□□□ -0.23
SgcbP82349 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.63□□□□□ -0.23
SgcbP82349 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.63□□□□□ -0.23
SgcbP82349 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SgcbP82349 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.63□□□□□ -0.23
SgcbP82349 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.63□□□□□ -0.23
SgcbP82349 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.63□□□□□ -0.23
SgcbP82349 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.63□□□□□ -0.23
SgcbP82349 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.63□□□□□ -0.23
SgcbP82349 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.63□□□□□ -0.23
SgcbP82349 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SgcbP82349 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.63□□□□□ -0.23
SgcbP82349 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SgcbP82349 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.63□□□□□ -0.23
SgcbP82349 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.63□□□□□ -0.23
SgcbP82349 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms