Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.54■□□□□ 0.24
Irf3P70671 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Irf3P70671 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Irf3P70671 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Irf3P70671 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.54■□□□□ 0.24
Irf3P70671 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Irf3P70671 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Irf3P70671 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.54■□□□□ 0.24
Irf3P70671 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.54■□□□□ 0.24
Irf3P70671 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.54■□□□□ 0.24
Irf3P70671 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.53■□□□□ 0.24
Irf3P70671 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Gm14701-201ENSMUST00000117156 348 ntBASIC16.53■□□□□ 0.24
Irf3P70671 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.53■□□□□ 0.24
Irf3P70671 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Mir6990-201ENSMUST00000183724 91 ntBASIC16.53■□□□□ 0.24
Irf3P70671 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Gm44335-201ENSMUST00000196879 141 ntBASIC16.53■□□□□ 0.24
Irf3P70671 Gm44297-201ENSMUST00000198304 141 ntBASIC16.53■□□□□ 0.24
Irf3P70671 Gm44346-201ENSMUST00000198851 141 ntBASIC16.53■□□□□ 0.24
Irf3P70671 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.53■□□□□ 0.24
Irf3P70671 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.53■□□□□ 0.24
Irf3P70671 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Irf3P70671 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Irf3P70671 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Irf3P70671 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Irf3P70671 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Irf3P70671 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.52■□□□□ 0.24
Irf3P70671 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.52■□□□□ 0.24
Irf3P70671 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Irf3P70671 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Irf3P70671 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Irf3P70671 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Irf3P70671 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Irf3P70671 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.52■□□□□ 0.24
Irf3P70671 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Irf3P70671 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Irf3P70671 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.52■□□□□ 0.24
Irf3P70671 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.52■□□□□ 0.24
Irf3P70671 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Irf3P70671 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.52■□□□□ 0.24
Irf3P70671 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Irf3P70671 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Irf3P70671 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Irf3P70671 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Irf3P70671 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Irf3P70671 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Irf3P70671 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Irf3P70671 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Irf3P70671 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Irf3P70671 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.51■□□□□ 0.23
Irf3P70671 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Irf3P70671 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.51■□□□□ 0.23
Irf3P70671 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.51■□□□□ 0.23
Irf3P70671 Gm5312-201ENSMUST00000203728 547 ntBASIC16.51■□□□□ 0.23
Irf3P70671 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Irf3P70671 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Irf3P70671 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.51■□□□□ 0.23
Irf3P70671 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Irf3P70671 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Irf3P70671 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Irf3P70671 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Irf3P70671 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Irf3P70671 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Irf3P70671 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Irf3P70671 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Irf3P70671 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Irf3P70671 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Irf3P70671 Gm6973-201ENSMUST00000117080 721 ntBASIC16.5■□□□□ 0.23
Irf3P70671 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Irf3P70671 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms