Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdlim4P70271 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.76□□□□□ -0.37
Pdlim4P70271 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Grk6-207ENSMUST00000225925 2769 ntBASIC12.76□□□□□ -0.37
Pdlim4P70271 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pdlim4P70271 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pdlim4P70271 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pdlim4P70271 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.76□□□□□ -0.37
Pdlim4P70271 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pdlim4P70271 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pdlim4P70271 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Pdlim4P70271 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdlim4P70271 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Gm25990-201ENSMUST00000102440 86 ntBASIC12.75□□□□□ -0.37
Pdlim4P70271 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Gm7862-201ENSMUST00000121461 292 ntBASIC12.75□□□□□ -0.37
Pdlim4P70271 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Gm11780-201ENSMUST00000136880 516 ntBASIC12.75□□□□□ -0.37
Pdlim4P70271 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.75□□□□□ -0.37
Pdlim4P70271 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.75□□□□□ -0.37
Pdlim4P70271 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 App-207ENSMUST00000227737 2827 ntBASIC12.75□□□□□ -0.37
Pdlim4P70271 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim4P70271 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pdlim4P70271 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim4P70271 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim4P70271 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.74□□□□□ -0.37
Pdlim4P70271 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim4P70271 Mzt1-203ENSMUST00000227948 952 ntBASIC12.74□□□□□ -0.37
Pdlim4P70271 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pdlim4P70271 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim4P70271 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim4P70271 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim4P70271 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim4P70271 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim4P70271 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim4P70271 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms