Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC9.05□□□□□ -0.96
Rps28P62858 Gm42911-201ENSMUST00000199360 1630 ntBASIC9.05□□□□□ -0.96
Rps28P62858 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rps28P62858 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rps28P62858 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Rps28P62858 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rps28P62858 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rps28P62858 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rps28P62858 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rps28P62858 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rps28P62858 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.04□□□□□ -0.96
Rps28P62858 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
Rps28P62858 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC9.04□□□□□ -0.96
Rps28P62858 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.04□□□□□ -0.96
Rps28P62858 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC9.04□□□□□ -0.96
Rps28P62858 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.04□□□□□ -0.96
Rps28P62858 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Gm25925-201ENSMUST00000158314 306 ntBASIC9.04□□□□□ -0.96
Rps28P62858 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC9.04□□□□□ -0.96
Rps28P62858 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC9.04□□□□□ -0.96
Rps28P62858 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rps28P62858 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC9.03□□□□□ -0.96
Rps28P62858 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rps28P62858 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.03□□□□□ -0.96
Rps28P62858 Gm18165-201ENSMUST00000217426 928 ntBASIC9.03□□□□□ -0.96
Rps28P62858 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.03□□□□□ -0.96
Rps28P62858 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rps28P62858 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rps28P62858 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Rps28P62858 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.03□□□□□ -0.96
Rps28P62858 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Rps28P62858 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rps28P62858 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC9.02□□□□□ -0.96
Rps28P62858 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rps28P62858 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rps28P62858 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rps28P62858 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rps28P62858 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Rps28P62858 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Rps28P62858 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Rps28P62858 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Rps28P62858 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.02□□□□□ -0.97
Rps28P62858 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms