Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.8□□□□□ -0.36
Lsm5P62322 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lsm5P62322 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.8□□□□□ -0.36
Lsm5P62322 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lsm5P62322 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm5P62322 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm5P62322 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm5P62322 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm5P62322 Mir1199-201ENSMUST00000117015 119 ntBASIC12.79□□□□□ -0.36
Lsm5P62322 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm5P62322 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.79□□□□□ -0.36
Lsm5P62322 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Lsm5P62322 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.79□□□□□ -0.36
Lsm5P62322 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.79□□□□□ -0.36
Lsm5P62322 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lsm5P62322 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lsm5P62322 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lsm5P62322 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Lsm5P62322 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lsm5P62322 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.78□□□□□ -0.36
Lsm5P62322 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.78□□□□□ -0.36
Lsm5P62322 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lsm5P62322 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Lsm5P62322 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Lsm5P62322 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lsm5P62322 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lsm5P62322 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm5P62322 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.78□□□□□ -0.36
Lsm5P62322 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lsm5P62322 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms