Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm6P62313 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm6P62313 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm6P62313 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm6P62313 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lsm6P62313 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.43□□□□□ -0.26
Lsm6P62313 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lsm6P62313 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Lsm6P62313 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Lsm6P62313 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Lsm6P62313 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Lsm6P62313 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.43□□□□□ -0.26
Lsm6P62313 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44357-201ENSMUST00000195897 142 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm19658-201ENSMUST00000196231 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44367-201ENSMUST00000196836 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44350-201ENSMUST00000197197 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44390-201ENSMUST00000197533 144 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44313-201ENSMUST00000198018 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44486-201ENSMUST00000198508 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44314-201ENSMUST00000199263 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44394-201ENSMUST00000199558 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44484-201ENSMUST00000199873 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44466-201ENSMUST00000200264 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Gm44359-201ENSMUST00000200671 138 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.43□□□□□ -0.26
Lsm6P62313 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.43□□□□□ -0.26
Lsm6P62313 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lsm6P62313 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lsm6P62313 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.42□□□□□ -0.26
Lsm6P62313 Gm13418-201ENSMUST00000119097 944 ntBASIC13.42□□□□□ -0.26
Lsm6P62313 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.42□□□□□ -0.26
Lsm6P62313 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lsm6P62313 Gm6089-201ENSMUST00000197666 938 ntBASIC13.42□□□□□ -0.26
Lsm6P62313 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.42□□□□□ -0.26
Lsm6P62313 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.42□□□□□ -0.26
Lsm6P62313 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Rps4l-201ENSMUST00000071745 943 ntBASIC13.42□□□□□ -0.26
Lsm6P62313 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lsm6P62313 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.42□□□□□ -0.26
Lsm6P62313 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lsm6P62313 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.41□□□□□ -0.26
Lsm6P62313 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Gm25990-201ENSMUST00000102440 86 ntBASIC13.41□□□□□ -0.26
Lsm6P62313 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.41□□□□□ -0.26
Lsm6P62313 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms