Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrch1P62046 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lrch1P62046 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Lrch1P62046 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Lrch1P62046 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Lrch1P62046 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.97■□□□□ 0.47
Lrch1P62046 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Gm6218-201ENSMUST00000219812 628 ntBASIC17.97■□□□□ 0.47
Lrch1P62046 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Lrch1P62046 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.97■□□□□ 0.47
Lrch1P62046 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Lrch1P62046 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.97■□□□□ 0.47
Lrch1P62046 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.97■□□□□ 0.47
Lrch1P62046 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lrch1P62046 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Lrch1P62046 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Lrch1P62046 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.96■□□□□ 0.47
Lrch1P62046 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.96■□□□□ 0.47
Lrch1P62046 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.96■□□□□ 0.47
Lrch1P62046 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.96■□□□□ 0.47
Lrch1P62046 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lrch1P62046 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lrch1P62046 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lrch1P62046 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lrch1P62046 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.95■□□□□ 0.46
Lrch1P62046 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.95■□□□□ 0.46
Lrch1P62046 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrch1P62046 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrch1P62046 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrch1P62046 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.95■□□□□ 0.46
Lrch1P62046 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.95■□□□□ 0.46
Lrch1P62046 Gm6745-201ENSMUST00000199216 526 ntBASIC17.95■□□□□ 0.46
Lrch1P62046 Gm6180-201ENSMUST00000065243 498 ntBASIC17.95■□□□□ 0.46
Lrch1P62046 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrch1P62046 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.95■□□□□ 0.46
Lrch1P62046 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Lrch1P62046 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lrch1P62046 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.94■□□□□ 0.46
Lrch1P62046 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.94■□□□□ 0.46
Lrch1P62046 Gm29667-201ENSMUST00000190817 490 ntBASIC17.94■□□□□ 0.46
Lrch1P62046 Gm8515-201ENSMUST00000194852 576 ntBASIC17.94■□□□□ 0.46
Lrch1P62046 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.94■□□□□ 0.46
Lrch1P62046 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Lrch1P62046 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lrch1P62046 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrch1P62046 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lrch1P62046 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lrch1P62046 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms