Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubgcp3P58854 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tubgcp3P58854 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubgcp3P58854 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.66■□□□□ 0.1
Tubgcp3P58854 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.66■□□□□ 0.1
Tubgcp3P58854 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.66■□□□□ 0.1
Tubgcp3P58854 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.66■□□□□ 0.1
Tubgcp3P58854 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.66■□□□□ 0.1
Tubgcp3P58854 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Tubgcp3P58854 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.65■□□□□ 0.1
Tubgcp3P58854 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.65■□□□□ 0.1
Tubgcp3P58854 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.65■□□□□ 0.1
Tubgcp3P58854 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.65■□□□□ 0.1
Tubgcp3P58854 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubgcp3P58854 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Tubgcp3P58854 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Tubgcp3P58854 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.64■□□□□ 0.09
Tubgcp3P58854 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.64■□□□□ 0.09
Tubgcp3P58854 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tubgcp3P58854 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.63■□□□□ 0.09
Tubgcp3P58854 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Tubgcp3P58854 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Gm15358-201ENSMUST00000119249 520 ntBASIC15.63■□□□□ 0.09
Tubgcp3P58854 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tubgcp3P58854 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms