Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp25P57080 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp25P57080 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp25P57080 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp25P57080 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp25P57080 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp25P57080 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp25P57080 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp25P57080 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp25P57080 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Usp25P57080 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp25P57080 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp25P57080 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.35■□□□□ 0.37
Usp25P57080 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp25P57080 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp25P57080 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp25P57080 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp25P57080 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp25P57080 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.34■□□□□ 0.37
Usp25P57080 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.34■□□□□ 0.37
Usp25P57080 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Usp25P57080 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Usp25P57080 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Usp25P57080 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp25P57080 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp25P57080 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp25P57080 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.34■□□□□ 0.37
Usp25P57080 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp25P57080 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp25P57080 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp25P57080 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp25P57080 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Usp25P57080 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Usp25P57080 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.33■□□□□ 0.37
Usp25P57080 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp25P57080 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp25P57080 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Usp25P57080 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp25P57080 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp25P57080 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp25P57080 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp25P57080 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Usp25P57080 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Usp25P57080 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp25P57080 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms