Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.39□□□□□ -0.43
Sssca1P56873 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sssca1P56873 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sssca1P56873 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sssca1P56873 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.39□□□□□ -0.43
Sssca1P56873 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.39□□□□□ -0.43
Sssca1P56873 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Sssca1P56873 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.39□□□□□ -0.43
Sssca1P56873 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sssca1P56873 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sssca1P56873 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Sssca1P56873 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sssca1P56873 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.39□□□□□ -0.43
Sssca1P56873 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.39□□□□□ -0.43
Sssca1P56873 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Sssca1P56873 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.38□□□□□ -0.43
Sssca1P56873 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sssca1P56873 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.38□□□□□ -0.43
Sssca1P56873 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Sssca1P56873 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.38□□□□□ -0.43
Sssca1P56873 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.38□□□□□ -0.43
Sssca1P56873 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.38□□□□□ -0.43
Sssca1P56873 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sssca1P56873 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.38□□□□□ -0.43
Sssca1P56873 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sssca1P56873 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sssca1P56873 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sssca1P56873 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Sssca1P56873 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Gm6433-201ENSMUST00000118634 875 ntBASIC12.37□□□□□ -0.43
Sssca1P56873 Gm9013-201ENSMUST00000132939 882 ntBASIC12.37□□□□□ -0.43
Sssca1P56873 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sssca1P56873 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.37□□□□□ -0.43
Sssca1P56873 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.37□□□□□ -0.43
Sssca1P56873 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.37□□□□□ -0.43
Sssca1P56873 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.37□□□□□ -0.43
Sssca1P56873 Gm18032-201ENSMUST00000222541 538 ntBASIC12.37□□□□□ -0.43
Sssca1P56873 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.37□□□□□ -0.43
Sssca1P56873 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sssca1P56873 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.37□□□□□ -0.43
Sssca1P56873 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sssca1P56873 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sssca1P56873 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Sssca1P56873 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sssca1P56873 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms