Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cks2P56390 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cks2P56390 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.79□□□□□ -0.36
Cks2P56390 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Cks2P56390 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Cks2P56390 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cks2P56390 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.79□□□□□ -0.36
Cks2P56390 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.79□□□□□ -0.36
Cks2P56390 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Gm8825-201ENSMUST00000182565 998 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm4518-201ENSMUST00000182638 718 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.79□□□□□ -0.36
Cks2P56390 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cks2P56390 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.79□□□□□ -0.36
Cks2P56390 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Cks2P56390 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cks2P56390 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Cks2P56390 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cks2P56390 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks2P56390 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cks2P56390 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.78□□□□□ -0.36
Cks2P56390 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Cks2P56390 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Gm14722-201ENSMUST00000118943 689 ntBASIC12.78□□□□□ -0.36
Cks2P56390 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cks2P56390 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cks2P56390 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.78□□□□□ -0.36
Cks2P56390 Gm5587-201ENSMUST00000206270 674 ntBASIC12.78□□□□□ -0.36
Cks2P56390 Gm45328-201ENSMUST00000210942 917 ntBASIC12.78□□□□□ -0.36
Cks2P56390 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.78□□□□□ -0.36
Cks2P56390 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.78□□□□□ -0.36
Cks2P56390 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Cks2P56390 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks2P56390 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cks2P56390 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks2P56390 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks2P56390 Gm13312-201ENSMUST00000119631 718 ntBASIC12.77□□□□□ -0.37
Cks2P56390 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms