Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.31■□□□□ 0.68
Msh6P54276 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.31■□□□□ 0.68
Msh6P54276 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Msh6P54276 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Msh6P54276 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Msh6P54276 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Msh6P54276 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Msh6P54276 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Msh6P54276 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.31■□□□□ 0.68
Msh6P54276 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.31■□□□□ 0.68
Msh6P54276 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msh6P54276 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Msh6P54276 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Msh6P54276 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Msh6P54276 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Msh6P54276 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh6P54276 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Msh6P54276 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.3■□□□□ 0.68
Msh6P54276 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh6P54276 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh6P54276 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh6P54276 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh6P54276 Gm5866-201ENSMUST00000177881 973 ntBASIC19.3■□□□□ 0.68
Msh6P54276 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.3■□□□□ 0.68
Msh6P54276 Gm43438-201ENSMUST00000198133 379 ntBASIC19.3■□□□□ 0.68
Msh6P54276 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Msh6P54276 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.3■□□□□ 0.68
Msh6P54276 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Msh6P54276 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Msh6P54276 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.29■□□□□ 0.68
Msh6P54276 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.29■□□□□ 0.68
Msh6P54276 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Msh6P54276 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.29■□□□□ 0.68
Msh6P54276 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Msh6P54276 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh6P54276 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.29■□□□□ 0.68
Msh6P54276 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Msh6P54276 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh6P54276 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh6P54276 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh6P54276 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Msh6P54276 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.28■□□□□ 0.68
Msh6P54276 Gm2810-201ENSMUST00000118681 990 ntBASIC19.28■□□□□ 0.68
Msh6P54276 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh6P54276 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh6P54276 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh6P54276 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh6P54276 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh6P54276 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh6P54276 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.27■□□□□ 0.68
Msh6P54276 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.27■□□□□ 0.68
Msh6P54276 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.27■□□□□ 0.68
Msh6P54276 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.27■□□□□ 0.68
Msh6P54276 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.27■□□□□ 0.68
Msh6P54276 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh6P54276 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msh6P54276 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msh6P54276 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Msh6P54276 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msh6P54276 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msh6P54276 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.26■□□□□ 0.67
Msh6P54276 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms