Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.15■□□□□ 0.02
Pdx1P52946 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pdx1P52946 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pdx1P52946 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pdx1P52946 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pdx1P52946 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Gm11764-201ENSMUST00000120221 623 ntBASIC15.14■□□□□ 0.01
Pdx1P52946 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.14■□□□□ 0.01
Pdx1P52946 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.14■□□□□ 0.01
Pdx1P52946 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.14■□□□□ 0.01
Pdx1P52946 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.14■□□□□ 0.01
Pdx1P52946 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.14■□□□□ 0.01
Pdx1P52946 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.14■□□□□ 0.01
Pdx1P52946 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.14■□□□□ 0.01
Pdx1P52946 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pdx1P52946 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pdx1P52946 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Pdx1P52946 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pdx1P52946 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
Pdx1P52946 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Pdx1P52946 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.13■□□□□ 0.01
Pdx1P52946 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.13■□□□□ 0.01
Pdx1P52946 Gm4899-201ENSMUST00000178708 719 ntBASIC15.13■□□□□ 0.01
Pdx1P52946 Gm27628-201ENSMUST00000184911 107 ntBASIC15.13■□□□□ 0.01
Pdx1P52946 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Pdx1P52946 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pdx1P52946 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pdx1P52946 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pdx1P52946 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pdx1P52946 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.12■□□□□ 0.01
Pdx1P52946 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pdx1P52946 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.12■□□□□ 0.01
Pdx1P52946 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.12■□□□□ 0.01
Pdx1P52946 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Gm10499-201ENSMUST00000174094 934 ntBASIC15.12■□□□□ 0.01
Pdx1P52946 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.12■□□□□ 0.01
Pdx1P52946 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.12■□□□□ 0.01
Pdx1P52946 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.12■□□□□ 0.01
Pdx1P52946 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pdx1P52946 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms