Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LtbrP50284 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LtbrP50284 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LtbrP50284 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LtbrP50284 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LtbrP50284 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LtbrP50284 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LtbrP50284 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LtbrP50284 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.95■□□□□ 0.46
LtbrP50284 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LtbrP50284 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LtbrP50284 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Prob1-201ENSMUST00000097619 3021 ntBASIC17.95■□□□□ 0.46
LtbrP50284 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Gm25287-201ENSMUST00000103846 110 ntBASIC17.95■□□□□ 0.46
LtbrP50284 Gm22918-201ENSMUST00000103855 110 ntBASIC17.95■□□□□ 0.46
LtbrP50284 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Gm27618-201ENSMUST00000183671 60 ntBASIC17.95■□□□□ 0.46
LtbrP50284 Mir8102-201ENSMUST00000184148 139 ntBASIC17.95■□□□□ 0.46
LtbrP50284 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.95■□□□□ 0.46
LtbrP50284 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.95■□□□□ 0.46
LtbrP50284 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.95■□□□□ 0.46
LtbrP50284 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.95■□□□□ 0.46
LtbrP50284 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LtbrP50284 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LtbrP50284 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
LtbrP50284 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LtbrP50284 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
LtbrP50284 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LtbrP50284 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LtbrP50284 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 App-207ENSMUST00000227737 2827 ntBASIC17.94■□□□□ 0.46
LtbrP50284 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.94■□□□□ 0.46
LtbrP50284 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.94■□□□□ 0.46
LtbrP50284 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
LtbrP50284 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Gm27989-201ENSMUST00000184721 107 ntBASIC17.94■□□□□ 0.46
LtbrP50284 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LtbrP50284 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtbrP50284 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LtbrP50284 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtbrP50284 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LtbrP50284 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LtbrP50284 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LtbrP50284 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtbrP50284 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtbrP50284 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtbrP50284 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LtbrP50284 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LtbrP50284 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.93■□□□□ 0.46
LtbrP50284 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.93■□□□□ 0.46
LtbrP50284 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.93■□□□□ 0.46
LtbrP50284 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.93■□□□□ 0.46
LtbrP50284 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtbrP50284 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtbrP50284 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.93■□□□□ 0.46
LtbrP50284 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtbrP50284 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.92■□□□□ 0.46
LtbrP50284 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LtbrP50284 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.92■□□□□ 0.46
LtbrP50284 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.92■□□□□ 0.46
LtbrP50284 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.92■□□□□ 0.46
LtbrP50284 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.92■□□□□ 0.46
LtbrP50284 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LtbrP50284 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.92■□□□□ 0.46
LtbrP50284 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtbrP50284 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.92■□□□□ 0.46
LtbrP50284 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
LtbrP50284 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms