Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Brca1P48754 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.99■□□□□ 0.31
Brca1P48754 Gm6266-201ENSMUST00000203844 806 ntBASIC16.99■□□□□ 0.31
Brca1P48754 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Brca1P48754 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Brca1P48754 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Brca1P48754 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Brca1P48754 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Brca1P48754 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.98■□□□□ 0.31
Brca1P48754 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Brca1P48754 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.98■□□□□ 0.31
Brca1P48754 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Brca1P48754 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.98■□□□□ 0.31
Brca1P48754 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Brca1P48754 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.98■□□□□ 0.31
Brca1P48754 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.98■□□□□ 0.31
Brca1P48754 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Brca1P48754 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.97■□□□□ 0.31
Brca1P48754 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Brca1P48754 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.97■□□□□ 0.31
Brca1P48754 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.97■□□□□ 0.31
Brca1P48754 Gm3436-201ENSMUST00000179930 840 ntBASIC16.97■□□□□ 0.31
Brca1P48754 Mir6420-201ENSMUST00000185032 102 ntBASIC16.97■□□□□ 0.31
Brca1P48754 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.97■□□□□ 0.31
Brca1P48754 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.97■□□□□ 0.31
Brca1P48754 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brca1P48754 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.96■□□□□ 0.31
Brca1P48754 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.96■□□□□ 0.31
Brca1P48754 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.96■□□□□ 0.31
Brca1P48754 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Brca1P48754 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.31
Brca1P48754 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.96■□□□□ 0.31
Brca1P48754 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brca1P48754 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Brca1P48754 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.96■□□□□ 0.3
Brca1P48754 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Brca1P48754 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Brca1P48754 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Brca1P48754 Gm13829-201ENSMUST00000119600 138 ntBASIC16.96■□□□□ 0.3
Brca1P48754 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.96■□□□□ 0.3
Brca1P48754 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.96■□□□□ 0.3
Brca1P48754 Gm9908-201ENSMUST00000211534 448 ntBASIC16.96■□□□□ 0.3
Brca1P48754 Shd-206ENSMUST00000225145 998 ntBASIC16.96■□□□□ 0.3
Brca1P48754 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.96■□□□□ 0.3
Brca1P48754 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Brca1P48754 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms