Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.55■□□□□ 0.08
Vps4bP46467 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vps4bP46467 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vps4bP46467 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps4bP46467 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps4bP46467 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps4bP46467 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vps4bP46467 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.54■□□□□ 0.08
Vps4bP46467 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.54■□□□□ 0.08
Vps4bP46467 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.54■□□□□ 0.08
Vps4bP46467 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vps4bP46467 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Gm4459-201ENSMUST00000118750 468 ntBASIC15.54■□□□□ 0.08
Vps4bP46467 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vps4bP46467 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Vps4bP46467 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps4bP46467 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.54■□□□□ 0.08
Vps4bP46467 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Vps4bP46467 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.53■□□□□ 0.08
Vps4bP46467 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vps4bP46467 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vps4bP46467 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Gm24589-201ENSMUST00000116692 94 ntBASIC15.53■□□□□ 0.08
Vps4bP46467 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.53■□□□□ 0.08
Vps4bP46467 Gm27357-201ENSMUST00000183754 135 ntBASIC15.53■□□□□ 0.08
Vps4bP46467 Gm27867-201ENSMUST00000184778 125 ntBASIC15.53■□□□□ 0.08
Vps4bP46467 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.53■□□□□ 0.08
Vps4bP46467 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.53■□□□□ 0.08
Vps4bP46467 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps4bP46467 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.53■□□□□ 0.08
Vps4bP46467 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.53■□□□□ 0.08
Vps4bP46467 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.53■□□□□ 0.08
Vps4bP46467 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vps4bP46467 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps4bP46467 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vps4bP46467 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Vps4bP46467 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vps4bP46467 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.52■□□□□ 0.08
Vps4bP46467 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vps4bP46467 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vps4bP46467 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Vps4bP46467 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Vps4bP46467 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.52■□□□□ 0.08
Vps4bP46467 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.52■□□□□ 0.08
Vps4bP46467 Gm8655-201ENSMUST00000221159 852 ntBASIC15.52■□□□□ 0.08
Vps4bP46467 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps4bP46467 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.52■□□□□ 0.08
Vps4bP46467 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Vps4bP46467 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
Vps4bP46467 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps4bP46467 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps4bP46467 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps4bP46467 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps4bP46467 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps4bP46467 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms