Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.66□□□□□ -0.06
Sox18P43680 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 Gm14716-201ENSMUST00000120138 718 ntBASIC14.66□□□□□ -0.06
Sox18P43680 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.66□□□□□ -0.06
Sox18P43680 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.66□□□□□ -0.06
Sox18P43680 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.66□□□□□ -0.06
Sox18P43680 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Sox18P43680 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.66□□□□□ -0.06
Sox18P43680 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.66□□□□□ -0.06
Sox18P43680 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Sox18P43680 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.66□□□□□ -0.06
Sox18P43680 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Sox18P43680 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox18P43680 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Sox18P43680 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Gm7488-201ENSMUST00000117148 684 ntBASIC14.65□□□□□ -0.06
Sox18P43680 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Sox18P43680 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox18P43680 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Sox18P43680 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox18P43680 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox18P43680 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.65□□□□□ -0.06
Sox18P43680 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox18P43680 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Sox18P43680 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.64□□□□□ -0.07
Sox18P43680 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox18P43680 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Gm12008-201ENSMUST00000117791 755 ntBASIC14.64□□□□□ -0.07
Sox18P43680 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Gm17837-201ENSMUST00000186435 985 ntBASIC14.64□□□□□ -0.07
Sox18P43680 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.64□□□□□ -0.07
Sox18P43680 Gm9794-201ENSMUST00000202370 423 ntBASIC14.64□□□□□ -0.07
Sox18P43680 Gm7730-201ENSMUST00000212486 454 ntBASIC14.64□□□□□ -0.07
Sox18P43680 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.64□□□□□ -0.07
Sox18P43680 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.64□□□□□ -0.07
Sox18P43680 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Sox18P43680 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox18P43680 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms