Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.21■□□□□ 0.35
Sdc2P43407 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc2P43407 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sdc2P43407 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Sdc2P43407 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sdc2P43407 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sdc2P43407 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.2■□□□□ 0.34
Sdc2P43407 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.2■□□□□ 0.34
Sdc2P43407 Gm12497-201ENSMUST00000138778 237 ntBASIC17.2■□□□□ 0.34
Sdc2P43407 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sdc2P43407 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.2■□□□□ 0.34
Sdc2P43407 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.2■□□□□ 0.34
Sdc2P43407 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Sdc2P43407 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Sdc2P43407 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc2P43407 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.2■□□□□ 0.34
Sdc2P43407 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.19■□□□□ 0.34
Sdc2P43407 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.19■□□□□ 0.34
Sdc2P43407 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sdc2P43407 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sdc2P43407 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Sdc2P43407 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Sdc2P43407 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Sdc2P43407 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.19■□□□□ 0.34
Sdc2P43407 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.19■□□□□ 0.34
Sdc2P43407 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.19■□□□□ 0.34
Sdc2P43407 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sdc2P43407 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc2P43407 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Sdc2P43407 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.18■□□□□ 0.34
Sdc2P43407 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.18■□□□□ 0.34
Sdc2P43407 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Gm8344-201ENSMUST00000119813 856 ntBASIC17.18■□□□□ 0.34
Sdc2P43407 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.18■□□□□ 0.34
Sdc2P43407 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.18■□□□□ 0.34
Sdc2P43407 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Sdc2P43407 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.18■□□□□ 0.34
Sdc2P43407 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.18■□□□□ 0.34
Sdc2P43407 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sdc2P43407 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.18■□□□□ 0.34
Sdc2P43407 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc2P43407 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.18■□□□□ 0.34
Sdc2P43407 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.18■□□□□ 0.34
Sdc2P43407 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sdc2P43407 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Gm15372-201ENSMUST00000120729 834 ntBASIC17.17■□□□□ 0.34
Sdc2P43407 Gm27357-201ENSMUST00000183754 135 ntBASIC17.17■□□□□ 0.34
Sdc2P43407 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.17■□□□□ 0.34
Sdc2P43407 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms