Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.43□□□□□ -0.1
Sox6P40645 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox6P40645 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox6P40645 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox6P40645 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox6P40645 Gm13312-201ENSMUST00000119631 718 ntBASIC14.42□□□□□ -0.1
Sox6P40645 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox6P40645 Rprl3-201ENSMUST00000157400 290 ntBASIC14.42□□□□□ -0.1
Sox6P40645 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox6P40645 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox6P40645 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox6P40645 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox6P40645 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sox6P40645 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox6P40645 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sox6P40645 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sox6P40645 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Sox6P40645 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.41□□□□□ -0.1
Sox6P40645 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sox6P40645 Gm27357-201ENSMUST00000183754 135 ntBASIC14.41□□□□□ -0.1
Sox6P40645 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.41□□□□□ -0.1
Sox6P40645 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox6P40645 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Sox6P40645 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox6P40645 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sox6P40645 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox6P40645 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.4□□□□□ -0.1
Sox6P40645 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.4□□□□□ -0.1
Sox6P40645 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox6P40645 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.4□□□□□ -0.1
Sox6P40645 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox6P40645 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sox6P40645 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox6P40645 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox6P40645 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.39□□□□□ -0.11
Sox6P40645 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.39□□□□□ -0.11
Sox6P40645 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms