Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
VhlP40338 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VhlP40338 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VhlP40338 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VhlP40338 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VhlP40338 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VhlP40338 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VhlP40338 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.58□□□□□ -0.4
VhlP40338 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.58□□□□□ -0.4
VhlP40338 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VhlP40338 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VhlP40338 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VhlP40338 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VhlP40338 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VhlP40338 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VhlP40338 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.57□□□□□ -0.4
VhlP40338 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VhlP40338 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VhlP40338 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.57□□□□□ -0.4
VhlP40338 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.57□□□□□ -0.4
VhlP40338 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.57□□□□□ -0.4
VhlP40338 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
VhlP40338 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.57□□□□□ -0.4
VhlP40338 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VhlP40338 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VhlP40338 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VhlP40338 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VhlP40338 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VhlP40338 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VhlP40338 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
VhlP40338 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Efs-202ENSMUST00000227037 2540 ntBASIC12.56□□□□□ -0.4
VhlP40338 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VhlP40338 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VhlP40338 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
VhlP40338 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.55□□□□□ -0.4
VhlP40338 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VhlP40338 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VhlP40338 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VhlP40338 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VhlP40338 Mir770-201ENSMUST00000103252 94 ntBASIC12.55□□□□□ -0.4
VhlP40338 Gm6433-201ENSMUST00000118634 875 ntBASIC12.55□□□□□ -0.4
VhlP40338 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.55□□□□□ -0.4
VhlP40338 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms