Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cxcl12P40224 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.71■□□□□ 0.11
Cxcl12P40224 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cxcl12P40224 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cxcl12P40224 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cxcl12P40224 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.7■□□□□ 0.1
Cxcl12P40224 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.7■□□□□ 0.1
Cxcl12P40224 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cxcl12P40224 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.7■□□□□ 0.1
Cxcl12P40224 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.7■□□□□ 0.1
Cxcl12P40224 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.7■□□□□ 0.1
Cxcl12P40224 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.7■□□□□ 0.1
Cxcl12P40224 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.7■□□□□ 0.1
Cxcl12P40224 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl12P40224 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.69■□□□□ 0.1
Cxcl12P40224 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.69■□□□□ 0.1
Cxcl12P40224 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cxcl12P40224 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.69■□□□□ 0.1
Cxcl12P40224 Asic1-205ENSMUST00000228185 1818 ntBASIC15.69■□□□□ 0.1
Cxcl12P40224 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.69■□□□□ 0.1
Cxcl12P40224 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Gm29667-201ENSMUST00000190817 490 ntBASIC15.69■□□□□ 0.1
Cxcl12P40224 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.69■□□□□ 0.1
Cxcl12P40224 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.69■□□□□ 0.1
Cxcl12P40224 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.69■□□□□ 0.1
Cxcl12P40224 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.69■□□□□ 0.1
Cxcl12P40224 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl12P40224 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cxcl12P40224 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Gm24543-201ENSMUST00000103867 82 ntBASIC15.68■□□□□ 0.1
Cxcl12P40224 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Gm12091-201ENSMUST00000146791 830 ntBASIC15.68■□□□□ 0.1
Cxcl12P40224 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Gm8602-201ENSMUST00000184045 607 ntBASIC15.68■□□□□ 0.1
Cxcl12P40224 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.68■□□□□ 0.1
Cxcl12P40224 Gm18018-201ENSMUST00000198273 408 ntBASIC15.68■□□□□ 0.1
Cxcl12P40224 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl12P40224 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cxcl12P40224 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl12P40224 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.67■□□□□ 0.1
Cxcl12P40224 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl12P40224 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.67■□□□□ 0.1
Cxcl12P40224 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl12P40224 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl12P40224 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms