Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Foxa1P35582 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.16□□□□□ -0.14
Foxa1P35582 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Foxa1P35582 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Foxa1P35582 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.16□□□□□ -0.14
Foxa1P35582 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxa1P35582 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Foxa1P35582 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.15□□□□□ -0.14
Foxa1P35582 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Foxa1P35582 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.15□□□□□ -0.14
Foxa1P35582 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Foxa1P35582 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.15□□□□□ -0.14
Foxa1P35582 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.15□□□□□ -0.14
Foxa1P35582 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.15□□□□□ -0.14
Foxa1P35582 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.15□□□□□ -0.14
Foxa1P35582 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxa1P35582 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Foxa1P35582 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.14□□□□□ -0.15
Foxa1P35582 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.14□□□□□ -0.15
Foxa1P35582 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.14□□□□□ -0.15
Foxa1P35582 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.14□□□□□ -0.15
Foxa1P35582 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Gm7787-201ENSMUST00000216858 688 ntBASIC14.14□□□□□ -0.15
Foxa1P35582 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.14□□□□□ -0.15
Foxa1P35582 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.14□□□□□ -0.15
Foxa1P35582 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Foxa1P35582 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.14□□□□□ -0.15
Foxa1P35582 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Foxa1P35582 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.14□□□□□ -0.15
Foxa1P35582 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Foxa1P35582 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Foxa1P35582 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.14□□□□□ -0.15
Foxa1P35582 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Foxa1P35582 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Foxa1P35582 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Foxa1P35582 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Foxa1P35582 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Foxa1P35582 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms