Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Thbs1P35441 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.15□□□□□ -0.14
Thbs1P35441 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Thbs1P35441 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Thbs1P35441 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Gm4535-201ENSMUST00000182274 558 ntBASIC14.15□□□□□ -0.14
Thbs1P35441 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.15□□□□□ -0.14
Thbs1P35441 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.15□□□□□ -0.14
Thbs1P35441 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.15□□□□□ -0.14
Thbs1P35441 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.15□□□□□ -0.14
Thbs1P35441 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.15□□□□□ -0.14
Thbs1P35441 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Gm10355-201ENSMUST00000097146 517 ntBASIC14.15□□□□□ -0.14
Thbs1P35441 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Thbs1P35441 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Thbs1P35441 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Thbs1P35441 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Thbs1P35441 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.15□□□□□ -0.14
Thbs1P35441 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Thbs1P35441 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Thbs1P35441 Grk6-207ENSMUST00000225925 2769 ntBASIC14.15□□□□□ -0.14
Thbs1P35441 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thbs1P35441 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Thbs1P35441 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Thbs1P35441 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.14□□□□□ -0.15
Thbs1P35441 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Gm11780-201ENSMUST00000136880 516 ntBASIC14.14□□□□□ -0.15
Thbs1P35441 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Gm27646-201ENSMUST00000183989 110 ntBASIC14.14□□□□□ -0.15
Thbs1P35441 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.14□□□□□ -0.15
Thbs1P35441 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.14□□□□□ -0.15
Thbs1P35441 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Thbs1P35441 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Thbs1P35441 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Thbs1P35441 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thbs1P35441 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Thbs1P35441 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Thbs1P35441 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.13□□□□□ -0.15
Thbs1P35441 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Gm6296-201ENSMUST00000222599 943 ntBASIC14.13□□□□□ -0.15
Thbs1P35441 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Thbs1P35441 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.13□□□□□ -0.15
Thbs1P35441 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thbs1P35441 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Thbs1P35441 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Thbs1P35441 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Thbs1P35441 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Thbs1P35441 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Thbs1P35441 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Thbs1P35441 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Thbs1P35441 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Thbs1P35441 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Thbs1P35441 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.12□□□□□ -0.15
Thbs1P35441 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Thbs1P35441 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Thbs1P35441 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms