Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.12□□□□□ -0.15
Sftpa1P35242 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.12□□□□□ -0.15
Sftpa1P35242 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.12□□□□□ -0.15
Sftpa1P35242 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.12□□□□□ -0.15
Sftpa1P35242 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sftpa1P35242 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sftpa1P35242 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sftpa1P35242 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.11□□□□□ -0.15
Sftpa1P35242 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.11□□□□□ -0.15
Sftpa1P35242 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.11□□□□□ -0.15
Sftpa1P35242 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.11□□□□□ -0.15
Sftpa1P35242 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sftpa1P35242 Mir8102-201ENSMUST00000184148 139 ntBASIC14.11□□□□□ -0.15
Sftpa1P35242 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.11□□□□□ -0.15
Sftpa1P35242 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Gm6888-201ENSMUST00000221983 706 ntBASIC14.11□□□□□ -0.15
Sftpa1P35242 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.11□□□□□ -0.15
Sftpa1P35242 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sftpa1P35242 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sftpa1P35242 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Sftpa1P35242 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sftpa1P35242 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.11□□□□□ -0.15
Sftpa1P35242 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sftpa1P35242 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sftpa1P35242 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sftpa1P35242 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sftpa1P35242 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sftpa1P35242 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Sftpa1P35242 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Sftpa1P35242 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.1□□□□□ -0.15
Sftpa1P35242 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
Sftpa1P35242 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.1□□□□□ -0.15
Sftpa1P35242 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.1□□□□□ -0.15
Sftpa1P35242 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sftpa1P35242 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.1□□□□□ -0.15
Sftpa1P35242 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sftpa1P35242 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Sftpa1P35242 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.09□□□□□ -0.15
Sftpa1P35242 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.09□□□□□ -0.15
Sftpa1P35242 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
Sftpa1P35242 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sftpa1P35242 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.09□□□□□ -0.15
Sftpa1P35242 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.09□□□□□ -0.15
Sftpa1P35242 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sftpa1P35242 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms