Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.37□□□□□ -0.27
Apoc1P34928 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Apoc1P34928 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.37□□□□□ -0.27
Apoc1P34928 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Gm15794-201ENSMUST00000120182 631 ntBASIC13.37□□□□□ -0.27
Apoc1P34928 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.37□□□□□ -0.27
Apoc1P34928 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.37□□□□□ -0.27
Apoc1P34928 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Apoc1P34928 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Apoc1P34928 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.37□□□□□ -0.27
Apoc1P34928 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Apoc1P34928 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Apoc1P34928 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Apoc1P34928 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Apoc1P34928 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Apoc1P34928 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.36□□□□□ -0.27
Apoc1P34928 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.36□□□□□ -0.27
Apoc1P34928 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Gm9172-201ENSMUST00000212092 954 ntBASIC13.36□□□□□ -0.27
Apoc1P34928 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.36□□□□□ -0.27
Apoc1P34928 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Apoc1P34928 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Apoc1P34928 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Apoc1P34928 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Apoc1P34928 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Apoc1P34928 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Apoc1P34928 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Apoc1P34928 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Apoc1P34928 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.35□□□□□ -0.27
Apoc1P34928 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm8825-201ENSMUST00000182565 998 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm4518-201ENSMUST00000182638 718 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Apoc1P34928 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.35□□□□□ -0.27
Apoc1P34928 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Apoc1P34928 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms